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1 Department of Physiology, Virginia Commonwealth University, Richmond, VA 23298, USA
2 Shemyakin-Ovchinnikov Institute of Bioorganic Chemistry, Russian Academy of Sciences, Moscow, 117997 Russia
The hERG channel has an unusually long S5P linker (residues 571613) that lines the outer mouth of the pore. Previously, we have shown that residues along this S5P linker are critical for the fast-inactivation process and K+ selectivity of the hERG channel. Here we used several approaches to probe the structure of this S5P linker and its interactions with other domains of the hERG channel. Circular dichroism and NMR analysis of a synthetic hERG S5P linker peptide suggested that this linker is quite dynamic: its central region (positions 583593) can be unstructured or helical, depending on whether it is immersed in an aqueous phase or in contact with a hydrophobic environment. Cysteine introduced into positions 583597 of the S5P linker can form intersubunit disulphide bonds, and at least four of them (at 584, 585, 588 and 589) can form disulphide bonds with counterparts from neighbouring subunits. We propose that the four S5P linkers in a hERG channel can engage in dynamic conformational changes during channel gating, and interactions between S5P linkers from neighbouring subunits contribute importantly to channel inactivation.
(Received 27 June 2005;
accepted after revision 2 September 2005;
first published online 8 September 2005)
Corresponding author G.-N. Tseng: Department of Physiology, Virginia Commonwealth University, 1101 E. Marshall Street, Richmond, VA 23298, USA. Email: gtseng{at}hsc.vcu.edu
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